[DB-151] | Health Data Architect Associate

[DB-151] | Health Data Architect Associate

26 mar

26 mar




Duration: Permanent

Salary: Competitive - depending on experience and profile

Candidates living Barcelona or EU and able to relocate rapidly would be preferable.

The role

The health data architect associate will work closely with the other members of the unit and contribute to updating STALICLA’s proprietary knowledge bases towards the characterization of “targetable” molecular, genetic and clinical features in neurodevelopmental disorders. S/he will participate in processing large scale biomedical and clinical data within the context of ongoing computational systems biology projects; ranging from implementing and running ETL and clinical data mining pipelines for heterogenous data,

to optimizing complex database queries and structures. In that context, s/he will be in charge of monitoring analysis and producing high-quality reports and log files to ensure reproducibility. Candidates with previous experience in NLP including text classification and topic modeling (preferably on clinical and biomedical text), as well as cloud computing.

Work environment

The STALICLA DDS office at the World Trade Center is located at the by the sea, overlooking the port of Barcelona and it has easy access to the public transportation. Perks at the office include free coffee, tea and fresh fruits.

Desired skills & software

Must have

- Comfortable working with Linux environment, experience in shell scripting

- Proficient in Python programming

- MySQL, PostgreSQL, MongoDB or equivalent

- Demonstrable experience in NLP including text classification and topic modeling

(preferably on clinical and biomedical text)

- Experience in design and implementation of ETL data ingestion pipelines using

relational databases and Rest APIs Good to have

- Git/Gitlab, Makefile, Nextflow (or equivalent), Docker, Jenkins, R

- Experience with cluster and/or cloud computing (AWS preferred)

- Previous experience with big data analysis using Hadoop, Hive or Spark

- Experience in the analysis of NGS (RNA-seq and/or DNA-seq)

- Knowledge on medical ontologies and vocabularies

- Prior experience in the field of Neurodevelopmental disorders or CNS genetics

In addition, the candidate is expected to have:

- A high comfort level working in a high paced start-up environment, where a pragmatic, resourceful, well organized and effective approach is required with limited resources

- A hands-on, decisive approach and a proven ability to work independently and as a team player

- Excellent verbal and written communication skills in English

- A passionate, energetic and enthusiastic personality that will ensure commitment to

the company and its vision

Knowledge or interest in NDD or related therapeutic areas is an asset.

STALICLA promotes diversity, equal opportunity and inclusion. Female, minority and candidates with disabilities are strongly encouraged to apply.

Please submit application to:

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